Eric A. Franzosa

Biography

Publications

• Virulence factor discovery identifies associations between the Fic gene family and Fap2+ fusobacteria in colorectal cancer microbiomes.

  Nakatsu G, Ko D, Michaud M, Franzosa EA, Morgan XC, Huttenhower C, Garrett WS. mBio 2025 Jan 14

• A Small-Molecule Inhibitor of Gut Bacterial Urease Protects the Host from Liver Injury.

  Richards-Corke KC, Jiang Y, Yeliseyev V, Zhang Y, Franzosa EA, Wang ZA, Yapa Abeywardana M, Cole PA, Huttenhower C, Bry L, Balskus EP. ACS Chem Biol 2025 Jan 17

• Profiling lateral gene transfer events in the human microbiome using WAAFLE.

  Hsu TY, Nzabarushimana E, Wong D, Luo C, Beiko RG, Langille M, Huttenhower C, Nguyen LH, Franzosa EA. Nat Microbiol 2025

• Response of the gut microbiome and metabolome to dietary fiber in healthy dogs.

  Bhosle A, Jackson MI, Walsh AM, Franzosa EA, Badri DV, Huttenhower C. mSystems 2025 Jan 21

• MaAsLin 3: Refining and extending generalized multivariable linear models for meta-omic association discovery.

  Nickols WA, Kuntz T, Shen J, Maharjan S, Mallick H, Franzosa EA, Thompson KN, Nearing JT, Huttenhower C. bioRxiv 2024 Dec 14