Semi-supervised Double Deep Learning Temporal Risk Prediction (SeDDLeR) with Electronic Health Records.
Nogues IE, Wen J, Zhao Y, Bonzel CL, Castro VM, Lin Y, Xu S, Hou J, Cai T.
J Biomed Inform. 2024 Sep. 157:104685. PMID: 39004109
Primary Faculty
Tianxi Cai
Other Positions
Professor of Biomedical Informatics
Biomedical Informatics
Harvard Medical School
Links
Overview
Dr. Cai’s current research interests are mainly in the area of biomarker evaluation; model selection and validation; prediction methods; personalized medicine in disease diagnosis, prognosis and treatment; statistical inference with high dimensional data; and survival analysis.
In addition to her methdological research, Dr. Cai also collaborates with the I2B2 (Informatics for Integrating Biology and the Bedside) center on developing a scalable informatics framework that will bridge clinical research data and the vast data banks arising from basic science research in order to better understand the genetic bases of complex diseases.
Sc.D., 1999
Harvard University
Bibliography
Family history as the strongest predictor of aortic and peripheral aneurysms in patients with intracranial aneurysms.
Lai PMR, Akama-Garren E, Can A, Tirado SR, Castro VM, Dligach D, Finan S, Gainer VS, Shadick NA, Savova G, Murphy SN, Cai T, Weiss ST, Du R.
J Clin Neurosci. 2024 Aug. 126:128-134. PMID: 38870642
Semisupervised transfer learning for evaluation of model classification performance.
Wang L, Wang X, Liao KP, Cai T.
Biometrics. 2024 Jan 29. 80(1). PMID: 38465982
LATTE: Label-efficient incident phenotyping from longitudinal electronic health records.
Wen J, Hou J, Bonzel CL, Zhao Y, Castro VM, Gainer VS, Weisenfeld D, Cai T, Ho YL, Panickan VA, Costa L, Hong C, Gaziano JM, Liao KP, Lu J, Cho K, Cai T.
Patterns (N Y). 2024 Jan 12. 5(1):100906. PMID: 38264714
Endovascular Aneurysm Repair Devices as a Use Case for Postmarketing Surveillance of Medical Devices.
Wang X, Ayakulangara Panickan V, Cai T, Xiong X, Cho K, Cai T, Bourgeois FT.
JAMA Intern Med. 2023 10 01. 183(10):1090-1097. PMID: 37603326
Clinical phenotypes and outcomes in children with multisystem inflammatory syndrome across SARS-CoV-2 variant eras: a multinational study from the 4CE consortium.
Sperotto F, Gutiérrez-Sacristán A, Makwana S, Li X, Rofeberg VN, Cai T, Bourgeois FT, Omenn GS, Hanauer DA, Sáez C, Bonzel CL, Bucholz E, Dionne A, Elias MD, García-Barrio N, González TG, Issitt RW, Kernan KF, Laird-Gion J, Maidlow SE, Mandl KD, Ahooyi TM, Moraleda C, Morris M, Moshal KL, Pedrera-Jiménez M, Shah MA, South AM, Spiridou A, Taylor DM, Verdy G, Visweswaran S, Wang X, Xia Z, Zachariasse JM, Newburger JW, Avillach P.
EClinicalMedicine. 2023 Oct. 64:102212. PMID: 37745025
Semisupervised Calibration of Risk with Noisy Event Times (SCORNET) using electronic health record data.
Ahuja Y, Liang L, Zhou D, Huang S, Cai T.
Biostatistics. 2023 Jul 14. 24(3):760-775. PMID: 35166342
Semi-supervised calibration of noisy event risk (SCANER) with electronic health records.
Hong C, Liang L, Yuan Q, Cho K, Liao KP, Pencina MJ, Christiani DC, Cai T.
J Biomed Inform. 2023 08. 144:104425. PMID: 37331495
Utilizing biologic disease-modifying anti-rheumatic treatment sequences to subphenotype rheumatoid arthritis.
Das P, Weisenfeld D, Dahal K, De D, Feathers V, Coblyn JS, Weinblatt ME, Shadick NA, Cai T, Liao KP.
Arthritis Res Ther. 2023 06 02. 25(1):93. PMID: 37269020
Potential pitfalls in the use of real-world data for studying long COVID.
Zhang HG, Honerlaw JP, Maripuri M, Samayamuthu MJ, Beaulieu-Jones BR, Baig HS, L'Yi S, Ho YL, Morris M, Panickan VA, Wang X, Weber GM, Liao KP, Visweswaran S, Tan BWQ, Yuan W, Gehlenborg N, Muralidhar S, Ramoni RB, Kohane IS, Xia Z, Cho K, Cai T, Brat GA.
Nat Med. 2023 05. 29(5):1040-1043. PMID: 37055567
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